TY - JOUR
T1 - Structural determination of the sheath-forming polysaccharide of Sphaerotilus montanus using thiopeptidoglycan lyase which recognizes the 1,4 linkage between α-D-GalN and β-D-GlcA
AU - Kashiwabara, Daisuke
AU - Kondo, Keiko
AU - Usami, Ryoji
AU - Kan, Daisuke
AU - Kawamura, Izuru
AU - Kawasaki, Yuta
AU - Sato, Michio
AU - Nittami, Tadashi
AU - Suzuki, Ichiro
AU - Katahira, Masato
AU - Takeda, Minoru
N1 - Funding Information:
The authors acknowledge the use of NMR spectrometers due to the support of the Joint Usage/Research Program on Zero-Emission Energy Research at the Institute of Advanced Energy, Kyoto University (ZE2021A-09). This work was supported by a Grant-in-Aid for Scientific Research (C) 20K05846 from the Japan Society for the Promotion of Science . The funding source played no role in the study design; in the collection, analysis, and interpretation of data; in the writing of the report; or in the decision to submit the article for publication.
Publisher Copyright:
© 2018 Elsevier B.V.
PY - 2021/7/31
Y1 - 2021/7/31
N2 - Sphaerotilus natans is a filamentous sheath-forming bacterium commonly found in activated sludge. Its sheath is assembled from a thiolic glycoconjugate called thiopeptidoglycan. S. montanus ATCC-BAA-2725 is a sheath-forming member of stream biofilms, and its sheath is morphologically similar to that of S. natans. However, it exhibits heat susceptibility, which distinguishes it from the S. natans sheath. In this study, chemical composition and solid-state NMR analyses suggest that the S. montanus sheath is free of cysteine, indicating that disulfide linkage is not mandatory for sheath formation. The S. montanus sheath was successfully solubilized by N-acetylation, allowing solution-state NMR analysis to determine the sugar sequence. The sheath was susceptible to thiopeptidoglycan lyase prepared from the thiopeptidoglycan-assimilating bacterium, Paenibacillus koleovorans. The reducing ends of the enzymatic digests were labeled with 4-aminobenzoic acid ethyl ester, followed by HPLC. Two derivatives were detected, and their structures were determined. We found that the sheath has no peptides and is assembled as follows: [→4)-β-D-GlcA-(1→4)-β-D-Glc-(1→3)-β-D-GalNAc-(1→4)-α-D-GalNAc-(1→4)-α-D-GalN-(1→]n (β-D-Glc and α-D-GalNAc are stoichiometrically and substoichiometrically 3-O-acetylated, respectively). Thiopeptidoglycan lyase was thus confirmed to cleave the 1,4 linkage between α-D-GalN and β-D-GlcA, regardless of the peptide moiety. Furthermore, vital fluorescent staining of the sheath demonstrated that elongation takes place at the tips, as with the S. natans sheath.
AB - Sphaerotilus natans is a filamentous sheath-forming bacterium commonly found in activated sludge. Its sheath is assembled from a thiolic glycoconjugate called thiopeptidoglycan. S. montanus ATCC-BAA-2725 is a sheath-forming member of stream biofilms, and its sheath is morphologically similar to that of S. natans. However, it exhibits heat susceptibility, which distinguishes it from the S. natans sheath. In this study, chemical composition and solid-state NMR analyses suggest that the S. montanus sheath is free of cysteine, indicating that disulfide linkage is not mandatory for sheath formation. The S. montanus sheath was successfully solubilized by N-acetylation, allowing solution-state NMR analysis to determine the sugar sequence. The sheath was susceptible to thiopeptidoglycan lyase prepared from the thiopeptidoglycan-assimilating bacterium, Paenibacillus koleovorans. The reducing ends of the enzymatic digests were labeled with 4-aminobenzoic acid ethyl ester, followed by HPLC. Two derivatives were detected, and their structures were determined. We found that the sheath has no peptides and is assembled as follows: [→4)-β-D-GlcA-(1→4)-β-D-Glc-(1→3)-β-D-GalNAc-(1→4)-α-D-GalNAc-(1→4)-α-D-GalN-(1→]n (β-D-Glc and α-D-GalNAc are stoichiometrically and substoichiometrically 3-O-acetylated, respectively). Thiopeptidoglycan lyase was thus confirmed to cleave the 1,4 linkage between α-D-GalN and β-D-GlcA, regardless of the peptide moiety. Furthermore, vital fluorescent staining of the sheath demonstrated that elongation takes place at the tips, as with the S. natans sheath.
KW - Sheath
KW - Sphaerotilus montanus
KW - Thiopeptidoglycan lyase
UR - http://www.scopus.com/inward/record.url?scp=85105585211&partnerID=8YFLogxK
U2 - 10.1016/j.ijbiomac.2021.05.001
DO - 10.1016/j.ijbiomac.2021.05.001
M3 - Article
C2 - 33964269
AN - SCOPUS:85105585211
VL - 183
SP - 992
EP - 1001
JO - International Journal of Biological Macromolecules
JF - International Journal of Biological Macromolecules
SN - 0141-8130
ER -