Tomohiro Shimada

  • Source: Scopus
  • Calculated based on no. of publications stored in Pure and citations from Scopus
20042021

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  • 2005

    Transcription factor-promoter interaction networks

    Ishihama, A., Shimada, T., Ogasawara, H., Teramoto, J. & Yamamoto, K., 1 Dec 2005, Proceedings of the 2005 International Symposium on Micro-NanoMechatronics and Human Science, Eighth Symposium on Micro- and Nano-Mechatronics for Information-Based Society - The 21st Century COE Progr. p. 153-157 5 p. 1589982. (Proceedings of the 2005 International Symposium on Micro-NanoMechatronics and Human Science, Eighth Symposium on Micro- and Nano-Mechatronics for Information-Based Society - The 21st Century COE Progr; vol. 2005).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • 2006

    Multi-scale genetics towards understanding the hierarchy of transcription factor network in genome regulation

    Ishihama, A., Ogasawara, H., Shimada, T., Teramoto, J., Hasegawa, A., Umezawa, Y., Yabuki, K., Ishida, Y., Inaba, T., Matsui, M., Kitai, Y., Kori, A., Yamada, K., Hirao, K. & Yamamoto, K., 2006, 2006 IEEE International Symposium on Micro-Nano Mechanical and Human Science, MHS. 4110354. (2006 IEEE International Symposium on Micro-Nano Mechanical and Human Science, MHS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • 2007

    Multi-scale genetics of transcription network: Understanding the regulatory roles of all 300 transcription factors from a single organism Escherichia coli

    Ishihama, A., Ogasawara, H., Shimada, T., Teramoto, J., Hasegawa, A., Umezawa, Y., Yabuki, K., Ishida, Y., Inaba, T., Kori, A., Yamada, K., Kitai, Y., Kobayashi, N., Kato, D. & Yamamoto, K., 2007, 2007 International Symposium on Micro-NanoMechatronics and Human Science, MHS. p. 21-27 7 p. 4420820. (2007 International Symposium on Micro-NanoMechatronics and Human Science, MHS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • 2008

    Comprehensive analysis for the recognition sequences of DNA-binding transcription factors within the E. coli genome using the newly developed "Promoter Chip"

    Yamamoto, K., Shimada, T. & Ishihama, A., 1 Dec 2008, 2008 International Symposium on Micro-NanoMechatronics and Human Science, MHS 2008, with Symposium on "COE for Education and Research of Micro-Nano Mechatronics". p. 307-310 4 p. 4752468. (2008 International Symposium on Micro-NanoMechatronics and Human Science, MHS 2008).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • 2009

    Genomic SELEX for the genome-wide search of regulation targets by transcription factors: SELEX-clos and SELEX-chip procedures

    Shimada, T., Fujita, N., Yamamoto, K. & Ishihama, A., 1 Dec 2009, 20th Anniversary MHS 2009 and Micro-Nano Global COE - 2009 International Symposium on Micro-NanoMechatronics and Human Science. p. 259-261 3 p. 5351954. (20th Anniversary MHS 2009 and Micro-Nano Global COE - 2009 International Symposium on Micro-NanoMechatronics and Human Science).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    1 Citation (Scopus)
  • Single live-bacterial cell assay of promoter activity and regulation: Escherichia coli gcl promoter

    Teramoto, J., Yamanishi, Y., Magdy, E. S. H., Hasegawa, A., Nakajima, M., Shimada, T., Arai, F., Fukuda, T. & Ishihama, A., 2009, 20th Anniversary MHS 2009 and Micro-Nano Global COE - 2009 International Symposium on Micro-NanoMechatronics and Human Science. p. 255-258 4 p. 5351949. (20th Anniversary MHS 2009 and Micro-Nano Global COE - 2009 International Symposium on Micro-NanoMechatronics and Human Science).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • 2011

    Single molecule analysis of transcription factor-DNA complexes using atomic force microscopy

    Nakano, M., Teramoto, J., Shimada, T., Yamamoto, K. & Ishihama, A., 1 Jan 2011, 2011 Int. Symp. on Micro-NanoMechatronics and Human Science, Symp. on "COE for Education and Research of Micro-Nano Mechatronics", Symposium on "Hyper Bio Assembler for 3D Cellular System Innovation". IEEE Computer Society, p. 490-494 5 p. 6102240. (2011 Int. Symp. on Micro-NanoMechatronics and Human Science, Symp. on "COE for Education and Research of Micro-Nano Mechatronics", Symposium on "Hyper Bio Assembler for 3D Cellular System Innovation").

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review